Within-patient evolution of invasive Campylobacter jejuni reveals genetic drivers of antibiotic resistance and adaptation to human blood (genome assembly and annotation dataset)

This dataset includes the assembled contig (.fasta and .gbk files), the nucleotide sequences of the predicted genes, and the corresponding amino acid sequences of the stool isolate (Cj_PT_2015_CHUC_stool_1). This isolate was used as the reference for identifying inter- and intra-isolate SNPs and indels acquired throughout the microevolution of the invasive C. jejuni strain during infection. All raw sequence reads used in this study were deposited in the European Nucleotide Archive (ENA) (BioProject XXXXX). The associated article can be found here: TO BE ADDED