Differentially represented ASVs identified with DESeq2
收藏DataCite Commons2023-10-02 更新2024-08-18 收录
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https://figshare.com/articles/dataset/Differentially_represented_ASVs_identified_with_DESeq2/24230686/1
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资源简介:
Sets of differentially abundant ASVs identified using DESeq2 in each experimental variant described in Golebiewski et al. "<b>Colonization of axenic beet by rhizosphere bacteria takes place in discreet phases regardless of bioinculation with next generation bioinoculant</b>". Files are in the tsv (tab separated values) format. Figures (SVG files) showing at most top 20 DRFs (differentially represented features) or ternary plots are also included. Experimental variants are contained in file names in the form of S/R/L.S1/S2.B/C/M.early/late, e.g. S.S1.B.late. S - soil samples, R - roots, L - leaves; S1 - soil 1, S2 - soil 2; B - genotype B (<i>B</i><i>eta vulgaris</i> ssp. <i>vulgaris</i> cv. 'Bravo'), C - genotype C (<i>B. vulgaris</i> ssp. <i>vulgaris</i> cv. 'Casino'), M - genotype M (<i>B. vulgaris</i> ssp. <i>maritima</i>); early - early status, late - late status. Name of the variable defining compared groups is included in filenames after an underscore, e.g. _Inoculation.
提供机构:
figshare
创建时间:
2023-10-02



