Additional file 1: of Comparative analysis of rodent and small mammal viromes to better understand the wildlife origin of emerging infectious diseases

Table S1. Samples of the 55 animal species used in this study and the provinces and dates of collection. Table S2. The reads of virus under each family. Table S3. The reads of mammailan virus under each family. Table S4. Origin and accession number of viruses identified in this study. Table S5. Amino acid identity of rodents Arenavirus and representatives of other species. Table S6. The aa identities (%) of the predicted ORF1a and ORF1b between Rodent Arteriviruses and other known members of the family Arteriviridae (including a tentative member, WPDV). Table S7. The aa identities (%) between these hepaciviruses and other known rodent hepacivirus. Table S8. Amino acid identity (%)of rodents Hepatitis E and representatives of other Genotypes. Table S9. The aa identities (%) between these BtCoVs and other known members of the lineage-A beta-CoVs. Table S10. The aa identities (%) between these BtCoVs and other known members of alpha-CoVs. Table S11. Amino acid identity of rodents picornaviruses and representatives of other genera in P1, P2, and P3 regions. Table S12. Pairwise amino acid identities (%) of predicted gene products of RtAp-ParaV/NX2015 compared to other Jeilongvirus members. Table S13. Amino acid identity of rodents parvovirus and representatives of other genera. (XLSX 149 kb)