Row fastq files generated by 16S rRNA sequencing for the metabarcoding analysis of Hidalgo-Villeda et al. paper

Fastq files used for the microbiome profiling of the terminal ileal ans caecum content.

Sequencing of the terminal ileal content was performed at the Institute Hospitalo-Universitaire Méditerannée Infection, Marseille, France.

Sequencing of the caecum content was performed at Genoscreen, Lille, France

The sequencing methodology is described on the methods part of the paper "Prolonged dysbiosis and altered immunity despite physiological recovery in a mouse model of severe acute malnutrition under nutritional intervention, Hidalgo-Villeda et al.".

The metadata.xlsx table present the description and correspondance of each fastq files.