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Dataset of microscopy (Confocal and electron) - Outer epidermal edges mediate cell-cell adhesion for tissue integrity in plants

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Zenodo2025-04-29 更新2026-05-26 收录
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This dataset contains several sub dataset of Arabidopsis thaliana dark grown hypocotyls microscopy image obtained as reported in the study "Outer epidermal edges mediate cell-cell adhesion for tissue integrity in plants" (bioRxiv link). Airyscan: 3D stacks and 2D projections from propidium iodide and direct red 23 stained wild type Col-0 and the mutant arp2-1, qua2-1 and qua2-1 esmd1-1 acquired with a ziess LSM 980 confocal microscope airyscan detector and processed with airyscan joint deconvolution. Confocal: 3D stacks and 2D projections from propidium iodide stained wild type Col-0 and the mutant arp2-1 and qua2-1 acquired with a ziess LSM 800 confocal microscope. Confocal (Correlative): 3D stacks and 2D projections from propidium iodide stained wild type Col-0 and the mutant arp2-1 acquired with a ziess LSM 800 confocal microscope though a correlative microscopy approach with atomic force microscopy. The correlative AFM dataset is available in the related repository 10.5281/zenodo.15124336 with a mirrored data organization. Cryo-SEM: 2D Cryo-Scanning Electron Microscopy dataset of Col-0, arp2-1 and qua2-1. Spinning disk: 3D stacks and 2D projections from propidium iodide stained arp2-1 samples acquired during micro extensometer stretching with a Nikon/CrestOptics Cicero spinning dik microscope. TEM: 2D Transmission Electron Microscopy dataset of Col-0, arp2-1, qua2-1 and qua2-1 esmd1-1. Include Segmentation masks, local thinkness maps, and ROIs used for the cell wall thickness quantification on 4-day-old Col-0 samples.

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Zenodo
创建时间:
2025-04-02
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