Orthologous Gene Groups (OGGs) and their expression values

--refGroups_OrthoMCLoutput.txt: Orthologous Gene Groups (OGGs) identified by orthoMCL an ortholog calling software package (http://orthomcl.org/common/downloads/software/). Orthologous gene groups were generated for all proteins from available, closely-related reference proteomes obtain from the Ensembl Genome Browser. Including [abbreviation]: mammals [Rat]: Rattus_norvegicus.Rnor_5.0.75.pep.all.fa birds [Gal]: Gallus_gallus.Galgal4.75.pep.all.fa frogs [Xeno]: Xenopus_tropicalis.JGI_4.2.75.pep.all.fa fishes [Tilapia]: Tilapia-Oreochromis_niloticus.Orenil1.0.75.pep.all.fa --ALLsp_refGroupsIDs: the subset of OGGs that have membership in all four reference species --[species abbreviation]_OGGs.csv: Grouping of Ensembl Proteins into Orthologous Gene Groups for each species --[species abbreviation]_[reference abbreviation]Counts: bwa mapping idxstats output