Additional file 1 of Genome-wide identification and expression pattern analysis of R2R3-MYB transcription factor gene family involved in puerarin biosynthesis and response to hormone in Pueraria lobata var. thomsonii

Additional file 1: Table S1. MYB-binding domain of PtMYBs. Table S2. Details information of the identified PtR2R3-MYB genes. Table S3. The prediction of subcellular localization in PtR2R3-MYB proteins. Table S4. Duplication modes and Ka/Ks ratios of R2R3-MYB gene pairs in P. thomsonii. Table S5. Putative functions of the R2R3-MYB proteins in P. thomsonii and Arabidopsis. Table S6. Detailed information for the 10 motifs in the R2R3-MYB proteins of P. thomsonii. Table S7a. Correlation between puerarin contents, SGs, PtR2R3-MYBs by RNA-seq data in P. thomsonii. Table S7b. P values between puerarin contents, SGs, PtR2R3-MYBs by RNA-seq data in P. thomsonii. Table S8. Structural genes related to puerarin biosynthesis. Table S9a. Correlation between puerarin and 46 genes by qRT-PCR data in 9 samples. Table S9b. P values between puerarin and 46 genes by qRT-PCR data in 9 samples. Table S10a. Correlation between puerarin and 46 genes by qRT-PCR data in ZG11. Table S10b. P values between puerarin and 46 genes by qRT-PCR data in ZG11. Table S11a. Correlation between puerarin and 46 genes by qRT-PCR data in ZG39. Table S11b. P values between puerarin and 46 genes by qRT-PCR data in ZG39. Table S12a. Correlation between puerarin and 46 genes by qRT-PCR data in ZG19. Table S12b. P values between puerarin and 46 genes by qRT-PCR data in ZG19. Table S13. Prediction of cis-acting elements in the promoter regions of 44 genes. Table S14a. Correletion between 44 genes qRT-PCR data by GSH treatment in ZG11. Table S14b. P values between 44 genes qRT-PCR data by GSH treatment in ZG11. Table S15a. Correletion between 44 genes qRT-PCR data by MeJA treatment in ZG11. Table S15b. P values between 44 genes qRT-PCR data by MeJA treatment in ZG11. Table S16. Primer sequence for qRT-PCR. Table S17. Puerarin contents and gene expression level by qRT-PCR.