Number of k-mer > 2-fold enriched at non-coding sequences (n_noncoding), repeats (n_repeat) or both (n_both) across the 1,239 genome assemblies.
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The ratio of the number of k-mer > 2-fold enriched at both non-coding and repeats over the total number of k-mer enriched >2-fold is used to estimate recent repeat-induced point mutation activity (Fig 2E). For each assembly we report the estimated RIP status, i.e., “recent RIP” activity, “old RIP” activity or “no RIP” activity. (XLSX)
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2025-10-15
