Additional file 3 of Coordination of host and endosymbiont gene expression governs endosymbiont growth and elimination in the cereal weevil Sitophilus spp.

Additional file 3: S1. Mapping statistics. S2. Dual RNA-seq gene counts from Sitophilus oryzae. S3. Dual RNA-seq gene counts from Sodalis pierantonius. S4. Dual RNA-seq DEGs from Sitophilus oryzae. S5. Dual RNA-seq DEGs from Sodalis pierantonius. S6. Dual RNA-seq LRT results from Sitophilus oryzae. S7. Dual RNA-seq LRT results from Sodalis pierantonius. S8. RNA-seq gene counts from symbiotic and aposymbiotic Sitophilus oryzae. S9. RNA-seq DEGs  from symbiotic and aposymbiotic Sitophilus oryzae. S10. Profile of dual RNA-seq superclusters from Sitophilus oryzae. S11. Profile of dual RNA-seq superclusters from Sodalis pierantonius. S12. Profile of RNA-seq superclusters from symbiotic and aposymbiotic Sitophilus oryzae. S13. Dual RNA-seq functional enrichment analysis of supercluster from Sitophilus oryzae. S14: Dual RNA-seq functional enrichment analysis of supercluster from Sodalis pierantonius. S15. RNA-seq functional enrichment analysis of supercluster from symbiotic and aposymbiotic Sitophilus oryzae. S16. List of genes and abbreviations within main text. S17. List of signaling and immunity genes.