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2021-05-27
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Figure 2: Epitope Maps and confusion matrix with BM5 Ab Crystal inputs
One of AbEMap's applications is to map epitope on a given antigen crystal structure if the antibody structure (bound or unbound) is known. The results in this dataset are pdb files of the 40 antigens
DataCite Commons2025-05-01 更新80
Hydrogen Bonding Penalty upon Ligand Binding
Ligand binding involves breakage of hydrogen bonds with water molecules and formation of new hydrogen bonds between protein and ligand. In this work, the change of hydrogen bonding energy in the bindi
Figshare2016-01-18 更新10
Docking of native peptide (CRIPT) to bound structures and the best clustered one obtained from PRS.
aRMSD values between the top scoring pose in Ångstroms measured over all heavy atoms of the peptide and the peptide's position in the crystal structure.
NIAID Data Ecosystem10
Comparison of binding properties of vinblastine obtained from molecular docking using Autodock and experiments.
Comparison of binding properties of vinblastine obtained from molecular docking using Autodock and experiments.
Figshare2013-10-04 更新10
8F3-1H9-Ara h 6
8F3-1H9-Ara h 6 Descriptor: 1H9 heavy chain, 1H9 light chain kappa, 8F3 heavy chain, ... Authors: Spiller, B.W, Shrem, R.A. Deposit date: 2023-04-17 Release date: 2024-12-25 Last modified: 2025-01-29
Protein Data Bank Japan2025-01-29 更新10
