MOESM1 of Misidentification of runs of homozygosity islands in cattle caused by interference with copy number variation or large intermarker distances

Additional file 1: Table S1. Descriptive statistics of inbreeding levels based on the sum of merged ROH for each breed. Table S2. List of ROH islands for the three breeds. Table S3. List of CNVR for the three breeds. Table S4. Details of the positions of individual ROH islands, proportions of individuals with CNV at each marker and proportion of inbred individuals and percentage of individuals with copy gain or loss in each ROH island. Table S5. Description of the ROH islands that were identified as artefacts due to coverage gaps and consensus CNVR with both copy loss (copy loss or both copy loss and copy gain).