This dataset includes the data for training the protein function prediction models at github.com/stamakro/GCN-for-Structure-and-Function. For each protein, a pickle file is provided, containing its se
Part 6 contains: model_organisms_semsim_go_cats.txt : semantic similarity separated by GO category between the GO annotations from GOPredSim-ProtT5 before and after removing a given model organism
The ways of calculating precision and recall can be found at the captions of Table 4 and Table 3, respectively. Explanations of the best semantic similarity score can be found at the caption of Table
