Supplemental Material for Wybouw et al., 2019

Figures_S1-S9. Supplemental figures.
Tables_S1-S11. Supplemental tables.
File_S1.vcf.gz. A VCF file with genetic data for T. urticae strains SR-VP, Lon-Inb and segregating populations.
File_S2_Heber.fasta.gz. A FASTA file with the genomic sequence of strain Heber.
File_S3_Lon-Inb.fasta.gz. A FASTA file with the genomic sequence of strain Lon-Inb.
File_S4_Parrott.fasta.gz. A FASTA file with the genomic sequence of strain Parrott.
File_S5_RS.fasta.gz. A FASTA file with the genomic sequence of strain RS.
File_S6_ShCo.fasta.gz. A FASTA file with the genomic sequence of strain ShCo.
File_S7_SR-VP.fasta.gz. A FASTA file with the genomic sequence of strain SR-VP.
File_S8_WG-Del.fasta.gz. A FASTA file with the genomic sequence of strain WG-Del.
File_S9_Heber.bam. An alignment file (.bam format) of strain Heber sequences to the T. urticae Sanger assembly.
File_S10_Lon-Inb.bam. An alignment file (.bam format) of strain Lon-Inb sequences to the T. urticae Sanger assembly.
File_S11_Parrott.bam. An alignment file (.bam format) of strain Parrott sequences to the T. urticae Sanger assembly.
File_S12_RS.bam. An alignment file (.bam format) of strain RS sequences to the T. urticae Sanger assembly.
File_S13_ShCo.bam. An alignment file (.bam format) of strain ShCo sequences to the T. urticae Sanger assembly.
File_S14_SR-VP.bam. An alignment file (.bam format) of strain SR-VP sequences to the T. urticae Sanger assembly.
File_S15_WG-Del.bam. An alignment file (.bam format) of strain WG-Del sequences to the T. urticae Sanger assembly.
File_S16_Tetranychus_urticae_3_Pseudochromosomes.fasta.gz. pChr1-3 sequences (plus smaller scaffolds) for the consolidated T. urticae assembly in FASTA format.
File_S17_Tetranychus_urticae_3_pseudochromosome.06.23.2016.gff3.Gene models on the pChr1-3 T. urticae assembly in GFF3 format.

File_S18_Tetranychus_urticae_Gene_Annotations.txt. Functional description of T. urticae genes with coordinate information on the pChr1-3 assembly.