Ancient diversity in host-parasite interaction genes in a model parasitic nematode

Files associated with the "Ancient diversity in host-parasite interaction genes in a model parasitic nematode" manuscript. <strong>VCF files:</strong> HB1_vs_nxHelBake1.biallelic_noRefCall.qual.repeat_filtered.vcf.gz<br> HB2_vs_nxHelBake1.biallelic_noRefCall.qual.repeat_filtered.vcf.gz<br> HB3_vs_nxHelBake1.biallelic_noRefCall.qual.repeat_filtered.vcf.gz<br> HP1_vs_ngHelPoly1.biallelic_noRefCall.qual.repeat_filtered.vcf.gz<br> HP2_vs_ngHelPoly1.biallelic_noRefCall.qual.repeat_filtered.vcf.gz <strong><em>H. mixtum</em> genome assemblies:</strong><br> Hm16_merged_spades_scaffolds.fa.gz<br> Hm2_merged_spades_scaffolds.fa.gz <strong>Strongylomorph phylogeny:</strong> Strongylomorph_phylogeny_18Jan2023_20spp_511orthos.astral.nwk.gz <strong>Gene annotation files:</strong><br> ngHelPoly1.1.primary.final_annotations.cds.fa.gz<br> ngHelPoly1.1.primary.final_annotations.gff3.gz<br> ngHelPoly1.1.primary.final_annotations.proteins.fa.gz nxHelBake1.1.primary.final_annotations.cds.fa.gz<br> nxHelBake1.1.primary.final_annotations.gff3.gz<br> nxHelBake1.1.primary.final_annotations.proteins.fa.gz <strong>Curated repeat libraries:</strong><br> ngHelPoly1.1.repeats.01062023.fa.gz<br> nxHelBake1.1.repeats.01062023.fa.gz <strong>Assembled transcripts:</strong> ngHelPoly1_hq_transcripts.fa.gz nxHelBake1_hq_transcripts.fa.gz