Supplemental Material for Abu Diab et al., 2018

File S1 contains Southern blot analysis of unmethylated FX hESC
lines, (Figure S1A) and relative expression levels of FMR1 RNA in the hESCs by
Taqman qRT-PCR (Figure S1B). File S2 contains Bisulfite DNA sequencing data at
the boundaries of the single strand DNA displacements in XY hESC with
premutation (55200 repeats; uFM-ES-3) alleles. File S3 contains methylation-sensitive
quantitative assay of Skewed X-inactivation test in uFM-ES-2 hESCs. File S4 contains
Bisulfite footprinting analysis by deep-sequencing across the C9orf72 repeats
in WT hESCs. File 5S Bisulfite footprinting around the TSS in other loci. Table
S1 contains all the needed data about the different hESC lines we used. Table
S2 contains the sequences of all primers used for DRIP, colony bisulfite
footprinting, next-seq bisulfite footprinting and SNP analyzes.