Additional file 4 of A transcriptomic examination of encased rotifer embryos reveals the developmental trajectory leading to long-term dormancy; are they “animal seeds”?

Additional file 4: Figure. S1. Number of reads sequenced per sample across three REs and AMs developmental stages. S2 Fig. Comparison of the transcript abundance profiles of putative maternal genes between AMs and REs. S3 Fig. The Longevity pathway (worm) highlights differential transcript abundance between AM and RE (left panel) and highly abundant protein-encoding genes at 192 h in RE (right panel). S4 Fig. Very highly abundant gene transcripts (>4.251) of energy-yielding KEGG pathways. (>4.251) at 192 hr of RE. S5 Fig. KEGG signaling pathways (maps) highlighting protein-encoding genes with differential transcript abundance between AM and RE (left panel) and highly abundant transcripts at 192 hr in RE (right panel). S6 Fig. Lipid metabolism KEGG pathways (maps) highlighting protein-encoding genes with differential transcript abundance between AM and RE (left panels) and highly abundant transcripts at 192 hr in RE (right panel). S7 Fig. Light responding KEGG pathways (maps) highlighting protein-encoding genes with differential transcript abundance between AM and RE (left panels) and transcripts with high abundance at 192 hr in RE (right panels).