Additional file 1 of Genome of the parasitoid wasp Cotesia chilonis sheds light on amino acid resource exploitation

Additional file 1: Table S1. Genome sequencing data of C. chilonis. Table S2. Hi-C sequencing data of C. chilonis. Table S3. Hi-C scaffolding and assembled chromosomes (superscaffolds) of C. chilonis. Table S4. Classification of repeat sequences identified in the C. chilonis genome. Table S5. Amino acid biosynthetic pathway disruptions in C. chilonis and C. suppressalis. Table S6. Numbers of the four amino acid biosynthetic pathway genes in 72 arthropods from KEGG pathway database. Table S7. The concentration changes of each amino acids in host hemolymph after parasitism, this data is used for plotting Fig. 4. Table S8. Expression changes of amino acid synthetic pathway genes within three days after parasitism (FPKM values). Table S9. Expression changes of alanine, aspartate and glutamate metabolic pathway genes within three days after parasitism (FPKM values). Table S10. Expression changes of glycine, serine and threonine metabolic pathway genes within three days after parasitism (FPKM values). Table S11. Expression changes of cysteine and methionine metabolic pathway genes within three days after parasitism (FPKM values). Table S12. Expression changes of valine, leucine and isoleucine metabolic pathway genes within three days after parasitism (FPKM values). Table S13. Expression changes of lysine metabolic pathway genes within three days after parasitism (FPKM values). Table S14. Expression changes of arginine and proline metabolic pathway genes within three days after parasitism (FPKM values). Table S15. Expression changes of histidine metabolic pathway genes within three days after parasitism (FPKM values). Table S16. Expression changes of tyrosine metabolic pathway genes within three days after parasitism (FPKM values). Table S17. Expression changes of phenylalanine metabolic pathway genes within three days after parasitism (FPKM values). Table S18. Expression changes of tryptophan metabolic pathway genes within three days after parasitism (FPKM values). Table S19. Expression changes of translation-related genes (GO: 0006412) within three days after parasitism (FPKM values). Table S20. Expression changes of proteolysis-related gene set (GO: 0006508) within three days after parasitism (FPKM values). Table S21. Expression changes of insect storage protein genes within three days after parasitism (FPKM values). Table S22. Composition of Grace’s Insect Medium, according to Thermo Fisher, catalog number: 11605. Table S23. Parameters for quantification of 28 amino acids by UPLC-MS/MS.