Introduction Combined genotyping/whole genome sequencing and epidemiological data suggest that in endemic settings only a minority of Clostridium difficile infection, CDI, is acquired from other cases
Metadata for the 369 non-redundant KP genomes selected based on pairwise core SNP distances >20 kb. The table includes the Genome Context File ID (CGF ID), host type, isolation source, and geographica
Mathematical models that predict the spread of infectious diseases are an essential part of public health decisions for the introduction of new vaccines. These predictions use self-reported social con