SNP calls on WGS of Sporothrix schenckii isolates
收藏NIAID Data Ecosystem2026-04-25 收录
官方服务：
资源简介：
Natural variation of Sporothrix schenckii in different epidemic areas of the Brazilian territory
应用场景：
创建时间：
2020-11-30
相关数据集
Additional file 5 of Genomic epidemiology of the Los Angeles COVID-19 outbreak and the early history of the B.1.43 strain in the USA
Additional file 5: Table S5. Parameters for effective reproductive number estimation.
DataCite Commons2024-02-09 更新60
Table 3_Evolutionary epidemiology of the monkeypox virus in Shandong Province during the post-global outbreak era.xlsx
IntroductionMonkeypox virus (MPXV) is an emerging zoonotic pathogen with increasing human-to-human transmission. Since the first case in Shandong Province in June 2023, 61 cases were reported by the e
NIAID Data Ecosystem20
Streptococcus pyogenes Genome sequencing and assembly
A statewide genomic surveillance system for invasive Group A Streptococcus was developed to identify emerging strains and clusters of infections that warrant public health action. This serves as a mod
NIAID Data Ecosystem10
We report the reconstruction of transmission pathways by using WGS and phylogenetics in comparison to descriptive epidemiology in a major outbreak of KPC-2-producing ST258 Klebsiella pneumoniae (Kp). 152 isolates from 89 outbreak patients and 23 Kp strains not linked to the outbreak underwent WGS.. KPC outbreak at University Hospital in Leipzig
We report the reconstruction of transmission pathways by using WGS and phylogenetics in comparison to descriptive epidemiology in a major outbreak of KPC-2-producing ST258 Klebsiella pneumoniae (Kp).
NIAID Data Ecosystem50
Genomic epidemiology identifies emergence and rapid transmission of SARS-CoV-2 B.1.1.7 in the United States. Washington et al.
Number of positive tests, SGTF dropouts and B117 sequences at Helix from Oct 15, 2020 to Feb 19, 2021. The testing data has been filtered to include only those days with >= 3 tests to protect patient
NIAID Data Ecosystem20
