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Summary statistics for detection of selection using branch specific models of PAML.

NIAID Data Ecosystem2026-03-07 收录

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https://figshare.com/articles/dataset/_Summary_statistics_for_detection_of_selection_using_branch_specific_models_of_PAML_/265233 数据链接链接失效反馈

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NOTE: All trees were shown in figure 6.

应用场景：

创建时间：

2012-08-08

系统发育基因组学

正选择

BEP clade of the grass family (Poaceae) is composed of three subfamilies, i.e. Bambusoideae, Ehrhartoideae, and Pooideae. Controversies on the phylogenetic relationships among three subfamilies still

NIAID Data Ecosystem80

Results of maximum likelihood models of exon 2 of the DQB locus in B . musculus .

正选择

分子进化

Positive selected sites were identified using empirical Bayes procedure. Sites inferred under selection at the 99% level are listed in bold, and those at the 95% level are in italics, the putative PBR

NIAID Data Ecosystem40

Results of maximum-likelihood models for exon 2 of the DRB gene in the baiji.

分子进化

正选择

Analyses were completed using CodeML (included in the PAML 4 program suite). An alignment of 9 DRB sequences (213 bp) from the baiji was used as the input for CodeML. P is the number of parameters in

Figshare2015-12-02 更新20

Selection sites detected in RSV fusion protein genes.

病毒进化分析

正选择

§p-value http://www.datamonkey.org) with the single likelihood ancestor counting (SLAC), fixed effects likelihood (FEL), and internal fixed effects likelihood (IFEL) methods.

Figshare2015-12-02 更新60

Evidence of positive selection associated with placental loss in tiger sharks. Rhizoprionodon

鲨鱼基因组学

正选择

Sequenced transcriptome of many shark species to find orthologous genes. Aimed to identify signatures of positive selection in genes of particular lineages.

NIAID Data Ecosystem30

Summary statistics for detection of selection using branch specific models of PAML.

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