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Additional file 1: of Use of genome-scale models to get new insights into the marine actinomycete genus Salinispora

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Figshare2019-01-22 更新2026-04-29 收录
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https://figshare.com/articles/dataset/Additional_file_1_of_Use_of_genome-scale_models_to_get_new_insights_into_the_marine_actinomycete_genus_Salinispora/7612409
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Table S1. contains ortholog data used to build the Core model (worksheet1). Table S2. contains a heat map of InParanoid scores (worksheet2). Table S3. contains genome and available isolation metadata of Salinispora strains in Core (worksheet3). References used to extract data related to isolation metadata are listed in the table. Table S4. contains list of conserved and not conserved reactions in each mode (worksheet4). Tables S5, S6 and S7. contain reactions associated to essential genes in ST-CNB440, SA-CNH643 and SP-CNR114 models under DMM growth conditions, respectively (worksheet5). Table S8, S9 and S10. contain reactions associated to essential genes in ST-CNB440, SA-CNH643 and SP-CNR114 models under CM growth conditions, respectively (worksheet6). Table S11. contains growth rate ratio between deletion strain and wild type strains for each model under DMM and CM growth conditions (worksheet7). (XLSX 2620 kb)
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2019-01-22
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