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smORFer: a modular algorithm to detect small ORFs in prokaryotes

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NIAID Data Ecosystem2026-03-12 收录
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https://www.ncbi.nlm.nih.gov/sra/SRP261663
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We developed a novel algorithm, smORFer, detecting smORFs (e.g. <50 codons) which performs with higher accuracy in prokaryotic organisms. smORFer considers structural features of genetic sequence along with in-register translation and using Fourier transform converts them into a measurable score to faithfully select smORFs. The algorithm is executed in a modular way and dependent on the data available different modules can be tested. Overall design: Ribosome profiling of Staphylococcus aureus cultured in complex TBS medium
创建时间:
2021-06-19
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