This file includes 4 source codes of C program and 1 source code of Mathematica to calculate our models, which use Gillespie algorithm or hybrid simulation algorithm (for C codes), and steady state an
MassiveFold data generated for CASP16, in collaboration with CAPRI . 8040 predictions were generated for the target = 1005 x 8 sets of parameters. - a description of the setup...
Additional file 1. Stability Study of FE and BE. Jupyter notebook used to perform the stability study described in the Numerical comparison of the forward and backward Euler methods section.
