Nanopore adaptive sampling for metagenomic detection of human tick-borne pathogens

NIAID Data Ecosystem2026-03-13 收录

蜱传病原体

纳米孔宏基因组学

数据链接：

https://www.ncbi.nlm.nih.gov/bioproject/PRJNA790938 数据链接链接失效反馈

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资源简介：

Nanopore adaptive sampling for metagenomic detection of human tick-borne pathogens

创建时间：

2021-12-20

MOESM4 of Effect of rodent density on tick and tick-borne pathogen populations: consequences for infectious disease risk

蜱传病原体

宿主-媒介疾病风险建模

Additional file 4: Table S1. Daily temperature data from September 2012 to December 2015 collected from the nearest weather station (Deelen, KNMI, the Netherlands). Text S1. Primers and probes for det

Figshare2020-01-20 更新50

Percent identity and similarity of Salp15 coding sequences among different Ixodes species.

蜱传病原体

基因序列比较

Ipers-1, Ipers-2, Ipers-3, Ipers-4, Ipers-5 are from I. persulcatus collected in northern China; iper1 and iper2 are from I. persulcatus collected in Japan; iper3 is from I. persulcatus collected in R

Figshare2015-12-02 更新40

Use of the Ion Torrent PGM for Determining the Genomic Sequences of Francisella and Coxiella-Like Endosymbionts and Rickettsia Directly from Hard Ticks. Dermacentor variabilis strain:Dvar22

蜱传病原体

基因组测序

Use of Ion Torrent PGM method to sequence the metagenome of Dermacentor variabilis

NIAID Data Ecosystem40

Anaplasmataceae, Rickettsiaceae and Coxiellaceae in African ticks

蜱传病原体

媒介传播病毒检测

This dataset includes information extracted from peer-reviewed publications reporting detection of Anaplasmataceae, Rickettsiaceae and/or Coxiellaceae in African ticks. Meta-analysis was performed on

Mendeley Data40

Deep Nanopore metagenomics of South San Francisco Bay expanded sequencing

纳米孔宏基因组学

微生物群落

Additional Oxford Nanopore PromethION sequencing of the surface water sample from USGS Station 36, South San Francisco Bay (July2022) originally described in PRJNA998863. Four PromethION flow cells ge

NIAID Data Ecosystem40

Nanopore adaptive sampling for metagenomic detection of human tick-borne pathogens

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