Additional file 1 of Genomic prediction with epistasis models: on the marker-coding-dependent performance of the extended GBLUP and properties of the categorical epistasis model (CE)

Rdata-file with two lists. The list “Mouse_Data” contains a genotype matrix of 1298 individuals and 9265 markers as well as a matrix with records of 13 traits of the individuals. The list “Simulated_Data” offers the genotypes and phenotypes of the 20 simulations. Each entry of this list is a list of two elements representing genotypes and phenotypes of the respective simulation. Genotypes are given by a matrix of 1000 individuals with 9000 markers. Phenotypes are provided as a data.frame of the 1000 individuals and the 9 different phenotypes described in the Methods section. (RDATA 64512 kb)