Annotation of de novo assembly from Arctic charr in Lake Thingvallavatn, Iceland

Tab-delimited text file with detailed annotation of all the filtered transcripts in the Trinity assembly.gene_id: Trinity gene identification codetranscript_id: Trinity transcript identification codesprot_Top_BLASTX_hit: Top blastx hit from the SwissProt databaseTrEMBL_Top_BLASTX_hit: Top blastx hit from the TrEMBL databaseRNAMMER: ribosomal RNA predictionprot_id: Id for protein predictionprot_coords: Coordinates for predicted proteinssprot_Top_BLASTP_hit: Top blastp hit for predicted proteins from the SwissProt databaseTrEMBL_Top_BLASTP_hit: Top blastp hit for predicted proteins from the TrEMBL databasePfam: Protein domain prediction from PfamSignalP: Prediction of signal peptidesTmHMM: Prediction for transmembrane domainseggnog: Annotation to the eggNOG databasegene_ontology_blast: Gene ontology categories based on blast results from SwissProt and TrEMBLgene_ontology_pfam: Gene ontology based on Pfam protein domainsSSncbi_Top_BLASTN_trans: Id for top blastn transcripts in NCBI Salmo salar AnnotationSSncbi_Top_BLASTX_trans: Id for top blastx transcripts in NCBI Salmo salar AnnotationSSncbi_Top_BLASTN_gene_name: Gene name based on top blastn hit in the NCBI Salmo salar AnnotationSSncbi_Top_BLASTX_gene_name: Gene name based on top blastx hit in the NCBI Salmo salar AnnotationOM_Top_BLASTN_trans: Id for top blastn transcripts in Oncorhynchus mykiss genome annotationOM_Top_BLASTX_trans: Id for top blastx transcripts in Oncorhynchus mykiss genome annotationSalmoBase_Top_BLASTN_trans: Id for top blastn transcripts in SalmoBase Salmo salar AnnotationSalmoBase_Top_BLASTX_trans: Id for top blastx transcripts in SalmoBase Salmo salar AnnotationSalmoBase_Top_BLASTN_gene_name: Gene name based on top blastn hit in the SalmoBase Salmo salar AnnotationSalmoBase_Top_BLASTX_gene_name: Gene name based on top blastx hit in the SalmoBase Salmo salar Annotation