Additional file 1 of Mouse adaptation of human inflammatory bowel diseases microbiota enhances colonization efficiency and alters microbiome aggressiveness depending on the recipient colonic inflammatory environment

Supplementary file 1 contains R and Python code used in our analyses. Supplementary Table S1 contains Differential abundance analysis between groups excluding genera present in less than 10% of the samples. The Supplemental Figures and Experimental Methods file contains supplemental figures with figure legends and supplemental experimental procedures.