five

Data package for TreeSAPP's Current Protocols

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https://zenodo.org/record/5707451
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This dataset contains all data required for a new tutorial for the TreeSAPP. TreeSAPP is a Python package for gene-centric taxonomic and functional classification of organismal (e.g. genome) and multi-organismal (e.g. metagenome) datasets. Here, this dataset includes a reference package for the McrA gene and associated annotation files, genomic and proteomic data to query and update the reference package with, as well as metagenomes and metatranscriptomes from Sakinaw Lake, BC. Together, these data help tutorial users create and update reference package, classify query sequences, and calculate relative abundances, thereby experiencing the primary workflow modules TreeSAPP offers.
创建时间:
2023-01-02
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