遇见数据集

VEBA Test Dataset

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Zenodo2023-11-10 更新2026-05-26 收录
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# Testing Data The following fastq files are subsets of the original SRA sequences designed for getting assemblies that have prokaryotic, eukaryotic, and viral genomes. | id_sample | source_sra | format | type | num_seqs | min_len | avg_len | max_len | GC(%) ||-----------|-------------|--------|------|----------|---------|---------|---------|-------|| S1 | SRR17458614 | FASTQ | DNA | 1474203 | 75 | 150.5 | 151 | 46.91 || S2 | SRR17458615 | FASTQ | DNA | 1638398 | 75 | 150.5 | 151 | 46.92 || S3 | SRR17458630 | FASTQ | DNA | 2389989 | 75 | 150.4 | 151 | 56.38 || S4 | SRR17458638 | FASTQ | DNA | 3142566 | 75 | 150.5 | 151 | 46.34 | Also includes the following: Metagenomic assemblies using metaSPAdes with sorted BAM files from Bowtie2 Genomes, gene models, etc. Taxonomy classifications at the genome and genome cluster level Annotations for genes and protein clusters Biosynthetic gene clusters Clusters for genomes and proteins

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Zenodo
创建时间:
2023-11-10
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