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Gzipped tarball folder of all antiSMASH-produced genbank files of recovered BGCs from lichen samples

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Figshare2024-06-26 更新2026-04-28 收录
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https://figshare.com/articles/dataset/Gzipped_tarball_folder_of_all_antiSMASH-produced_genbank_files_of_recovered_BGCs_from_lichen_samples/26109124
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Biosynthetic gene clusters (BGCs) were predicted for all bacterial contigs greater than 3000 bp in length using antiSMASH (v 6.1.1). Eukaryotic contigs were split into fungal (Fungi), plant (Viridiplantae), animals (Metazoa), and unclassified kingdom fasta files. This separation was based on the MMSeqs2 classification as this has been shown to perform particularly well with eukaryotic sequences. Biosynthetic gene clusters were detected in fungal contigs (greater than 3000 bp) using antiSMASH (v 6.1.1) with the --taxon parameter set to fungi and the --genefinding-tool parameter set to glimmerhmm.
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2024-06-26
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