Fig 9_PyMOL analysis_6S5W_6SX1.pse

NIAID Data Ecosystem2026-05-10 收录

蛋白质结构预测

离子结合位点

数据链接：

https://figshare.com/articles/dataset/Fig_9_PyMOL_analysis_6S5W_6SX1_pse/26676040 数据链接链接失效反馈

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资源简介：

AlphaFold 3 models of L. acidophilus surface protein (UniProt ID Q5FIM8) with predicted Ca2+-binding sites.

创建时间：

2025-10-27

Catechol oxidases PSE files

蛋白质结构预测

植物酶学

Plant catechol oxidases structures predicted by AlphaFold2 with parameters( --db_preset=full_dbs --model_preset=monomer_casp14) and chose ranked_0.pdb file.

Figshare2022-07-18 更新70

Additional file 4: of Functional insights from proteome-wide structural modeling of Treponema pallidum subspecies pallidum, the causative agent of syphilis

蛋白质结构预测

梅毒病原体功能注释

Table S4. Comparison of T. pallidum primary and tertiary structure-based functional annotations using only the top-ranked Phyre2 model template for each protein comparison. (XLSX 33 kb)

NIAID Data Ecosystem40

Helical packing arrangement decoy discrimination using a data set of 71 sequences with 2 or more TM helices (n = 71) and a data set of 57 sequences with 3 or more helices (n = 57).

蛋白质结构预测

跨膜螺旋堆积判别

Accuracy reflects the frequency at which the native or native model helical packing arrangement achieved the highest score compared to the decoy set.

NIAID Data Ecosystem30

MassiveFold data for target T1266

蛋白质结构预测

生物信息学

MassiveFold data generated for CASP16, in collaboration with CAPRI . 8040 predictions were generated for the target = 1005 x 8 sets of parameters. - a description of the setup can be found in `Massive

DataCite Commons2025-05-14 更新60

PDB coordinates of the first model for the complex between human UPF1-HD and SMG6-[398–494] region generated by AlphaFold (v3).

蛋白质结构预测

分子相互作用

PDB coordinates of the first model for the complex between human UPF1-HD and SMG6-[398–494] region generated by AlphaFold (v3).

NIAID Data Ecosystem30