Additional file 1 of Identification of cell-type specific alternative transcripts in the multicellular alga Volvox carteri

Additional file 1: Figure S1. Verification gene and transcript expression within replicates. Figure S2. Verification of differences in gene and transcript expression between cell types. Figure S3. Alternate restriction criteria: all genes with two transcripts. Figure S4. Alternate restriction criteria: two oppositely expressed transcripts with large biases. Figure S5. Hand Curation Examples. Figure S6. Convergent Transcription Examples. Figure S7. Full-length gel-electrophoresis images for CTSAI verification experiments. Figure S8.Three-way alignments with Chlamydomonas homologs. Figure S9.  HISAT2-Ballgown protocol schematic. Document S1. Exon coordinates for the manually curated HISAT2 candidates.