遇见数据集

Genome-wide mapping of individual replication fork velocities using nanopore sequencing

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Zenodo2022-06-08 更新2026-05-26 收录
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These data are related to the <strong>"Genome-wide mapping of individual replication fork velocities using nanopore sequencing" </strong>manuscript by Theulot, Lacroix et al. (https://doi.org/10.1038/s41467-022-31012-0) and to the GitHub repository NanoForkSpeed (https://github.com/LacroixLaurent/NanoForkSpeed). BT1_run4.tar.gz contains the nanopore reads from a typical experiment as fast5 files. BT1_run4_mega.zip contains the result of the BrdU basecalling as described on the GitHub page in a modified bam file format as described on the GitHub page NanoForkSpeed/BrdU_Basecalling.. BT1_run4_Megalodon_00_smdata.rds contains the result of the parsing function for the modified bam file as described on the GitHub page NanoForkSpeed/BrdU_Basecalling. BT1_run4_Megalodon_00_NFS_data.rds contains the result of the fork detection procedure on the BT1_run4_Megalodon_00_smdata.rds file as described on the GitHub page NanoForkSpeed/Forks_Detection. BT1_run4_merged_NFS_data.rds contains the result of the NFS_merge function as described on the GitHub page NanoForkSpeed/Forks_Detection.

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Zenodo
创建时间:
2022-02-03
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