Supplementary data to "Changing microbial activities during low salinity acclimation in the brown alga Ectocarpus subulatus"

This data set contains supplementary data related to the paper: “Insights into the potential for mutualistic and harmful host–microbe interactions affecting brown alga freshwater acclimation”: https://onlinelibrary.wiley.com/doi/10.1111/mec.16766

Metagenome.zip:This archive contains the reconstructed genomes of the different bacterial bins. The ".gbk" file was used for the reconstruction of metabolic networks. The ".fsa" and ".gff" files were used for "read mapping".

Metabolic_networks.zip:This archive contains all bacterial networks in the "padmet" format (see Aite et al. 2018). Furthermore, there is one file containing all gene-reaction associations (for all bins).

Expression_data.zip:This file contains algal gene expression data,  bacterial gene expression data (number of reads mapping to each feature in each sample), and, lastly, the summarized bacterial expression per metabolic reaction.