Additional file 1 of Independent flavonoid and anthocyanin biosynthesis in the flesh of a red-fleshed table grape revealed by metabolome and transcriptome co-analysis

Supplementary Material 1: Table S1: Primer sequences for genes used in assays in this study. Table S2: List of metabolites detected and quantified in the skin and flesh of ‘Mio Red’ grape. Table S3: List of metabolites differentially accumulated in the skin and flesh of ‘Mio red’ grape. Table S4: Relative contents of the 6 anthocyanin derivatives identified in the skin and flesh of ‘Mio Red’ grape. Table S5: Quality check of the raw data from the RNA-seq. Table S6: Overview of transcriptome sequencing dataset and mapping statistics of ‘Mio Red’ grape. Table S7: Expression profile (FPKM values) of the 23,786 genes detected in the skin and flesh of ‘Mio Red’ grape. Table S8: Identification of structural genes in flavonoid-biosynthesis pathway of ‘Mio Red’ grape. Table S9: GenBank accession numbers of the transcription factors in the phylogenetic tree analysis.