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sequencing of 16S rRNA gene in rice paddy soil

NIAID Data Ecosystem2026-04-25 收录

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生物炭对土壤细菌影响

数据链接：

https://www.ncbi.nlm.nih.gov/sra/SRP226572 数据链接链接失效反馈

官方服务：

资源简介：

To investigate the impact of different biochars on bacterial compositon in paddy soil

应用场景：

创建时间：

2019-10-25

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RawTables-USCGs_metagenomes.zip

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These tables contain individual information on the normalized microbial community composition in 140 metagenomes based on counting individual single-copy genes (RPKMs). This is supplementary informati

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otu97 table pre-filtration blank_included

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A: OTU table showing the 3334 OTUs identified in the MiSeq analysis of 107 samples analyzed by clustering 97% identical sequences in mothur before filtering. B: The same table rarefied at 8900 reads.

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Soil Microbial Sequencing

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Phyloseq workflow for microbial community analysis

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phyloseq

Complete, fully reproducible phyloseq workflow for microbiome analysis of herbivorous reef fish. Included are the HTML and Rmarkdown (.Rmd) files plus the output of the DADA2 pipeline in Rdata format

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Additional file 8 of Testing the stress gradient hypothesis in soil bacterial communities associated with vegetation belts in the Andean Atacama Desert

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生态学

Additional file 8. Table S3. OTUs frequency in each sample of prepuna, puna and steppe.

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