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Project comparing RNA prep and sequencing methods, as well as alignment and analysis methods.
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创建时间：
2017-01-25
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Muscle SATellite cell study (MSAT)
Skeletal muscle fiber type distribution has implications for human health, muscle function and performance. This knowledge has been gathered using labor-intensive and costly methodology that limited t
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Comprehensive comparative analysis of RNA sequencing methods for degraded or low input samples
RNA-Seq is an effective method to study the transcriptome, but can be difficult to apply to scarce or degraded RNA from fixed clinical samples, rare cell populations, or cadavers. Recent studies have
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Small RNA sequencing across diverse biofluids identifies optimal methods for exRNA isolation
We tested the efficiency and reproducibility of 10 RNA isolation methods on 5 different biofluids. Pooled human plasma and serum, bile and urine were used along with cell culture supernatants from hum
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Additional file 6: of Comprehensive assessment of multiple biases in small RNA sequencing reveals significant differences in the performance of widely used methods
Table S4..Statistics on percentages of reads mapping to different types of RNAs. Statistics are shown for the t-test comparisons of the percentages of reads mapping to each type of RNA for the data de
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Comparison of sRNA populations obtained using HD or standard Illumina adapters in M truncatula, without TAP treatment. Medicago truncatula
The sRNA population (sequence identity and distribution of abundances) in M truncatula was assessed using High Definition (HD) [Sorefan et al 2012, Xu et al 2015] or standard Illumina adapters; the us
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