List of proteins and their spectral counts used for Fig 1A.

Protein extracts from three biological replicates under two conditions (cells grown in LB medium LB A1, A2, and A3; and cells grown in LB medium exposed to ClO2− LBCLO2 B1, B2, and B3) were subjected to NuPAGE electrophoresis for a short migration. The proteomes were treated and subjected to trypsin proteolysis. The resulting peptides were analyzed on an Orbitrap Exploris 480 tandem mass spectrometer coupled to a Vanquish Neo UHPLC. A protein is validated when at least two peptides were found in one of the samples and at least one of these peptides is unambiguously assigned to this protein (this peptide is then proteotypic of the protein).
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