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Nascent RNA was sequenced using PRO-seq, in several epithelial cell types.
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2025-04-28
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Single-molecule nascent RNA sequencing reveals regulatory domain architecture ant promoters and enhancers. Single-molecule nascent RNA sequencing reveals regulatory domain architecture ant promoters and enhancers
CoPRO adapts PRO-cap for paired end sequencing, and includes a total of three different libraries that were enriched for either capped nascent RNAs only, uncapped nascent RNAs only, or both. With pair
NIAID Data Ecosystem70
Additional file 4 of Landscape of transcription termination in Arabidopsis revealed by single-molecule nascent RNA sequencing
Additional file 4: Table S3. Genes with cleaved readthrough transcripts enter the downstream genes in atxrn3.
Figshare2024-02-16 更新50
Transcriptome sequencing screening mRNA
Oxidative stress plays a pivotal role in age-related diseases, including oxidative aging, by promoting cellular damage and dysfunction. In this study, we performed transcriptome sequencing to identify
NIAID Data Ecosystem30
Additional file 5: of Nascent RNA sequencing analysis provides insights into enhancer-mediated gene regulation
Table S2. Transcriptional changes in gene body regions (S2a) and promoter-proximal regions (S2b) for active genes in Hdac3 KO vs. WT mouse livers. (XLSX 2301Â kb)
Figshare2024-02-13 更新60
Gene expression analysis of major histocompatibility complex II (MHCII) low and MHCII high, Tspan8-positive and Tspan8-negative medullary thymic epithelial cells.
RNA sequencing of Tspan8posMHCIIlo, Tspan8posMHCIIhi, Tspan8negMHCIIlo and Tspan8negMHCIIhi mTECs was performed in biological duplicates. Comparative gene expression profiling analysis of RNA-seq data
NIAID Data Ecosystem30
