Rett Syndrome Omics Datasets integrated into RettDb

NIAID Data Ecosystem2026-05-02 收录

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https://zenodo.org/record/12819273

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This datasets collection is part of the web resource: RettDb, the Rett Syndrome Omics Database. RettDb is fully described in this paper submitted to DATABASE: Cillàri, N., Neri, G., Pisanti, N., Milazzo, P., Borello, U. "RettDb: the Rett Syndrome Omics Database to navigate the Rett Syndrome genomic landscape" The table below contains a brief description of the data For a full description of the data, refer to the web resourse or this publication filenames description file-type H3K4me3_wt_Chip_seq.bedgraph.gz H3K4me3 ChipSeq bedgraph H3K4me3_wt_Chip_seq.bedgraph.gz.tbi H3K4me3 ChipSeq Index bedgraph index H3K9me3_wt_Chip_seq.bedgraph.gz H3K9me3 ChipSeq bedgraph H3K9me3_wt_Chip_seq.bedgraph.gz.tbi H3K9me3 ChipSeq Index bedgraph index H3K27ac_wt_Chip_seq.bedgraph.gz H3K27ac ChipSeq bedgraph H3K27ac_wt_Chip_seq.bedgraph.gz.tbi H3K27ac ChipSeq Index bedgraph index H3K36me3_wt_Chip_seq.bedgraph.gz H3K36me3 ChipSeq bedgraph H3K36me3_wt_Chip_seq.bedgraph.gz.tbi H3K36me3 ChipSeq Index bedgraph index H4K20me3_wt_Chip_seq.bedgraph.gz H4K20me3 ChipSeq bedgraph H4K20me3_wt_Chip_seq.bedgraph.gz.tbi H4K20me3 ChipSeq Index bedgraph index Mecp2_wt_ChiP_seq_1.bedgraph.gz Mecp2 ChipSeq bedgraph Mecp2_wt_ChiP_seq_1.bedgraph.gz.tbi Mecp2 ChipSeq Index bedgraph index Mecp2_wt_ChiP_seq_2.bedgraph.gz Mecp2 ChipSeq bedgraph Mecp2_wt_ChiP_seq_2.bedgraph.gz.tbi Mecp2 ChipSeq Index bedgraph index Mecp2_wt_ChiP_seq_3.bw.gz.bw Mecp2 ChipSeq bigwig Mecp2_RNA_seq_WT_vs_KO.bed.gz Mecp2 RNASeq bed Mecp2_RNA_seq_WT_vs_KO.bed.gz.tbi Mecp2 RNASeq Index bed index Mecp2_wt.hic Mecp2 WT chromatin conformation data hic Mecp2_ko.hic Mecp2 KO chromatin conformation data hic CpG_island_mm10.bed.gz CpG island bed CpG_island_mm10.bed.gz.tbi CpG island Index bed index FIMO_CISBP_TFBS_predictions.bed.gz FIMO CISBP TFBS Predictions bed FIMO_CISBP_TFBS_predictions.bed.gz.tbi FIMO CISBP TFBS Predictions Index bed index remap2022_CRMs.bb Remap2022 Cis Regulatory Modules bigbed remap2022_non_redundant_peak.bb Remap2022 Non Redundant Peaks bigbed hub.config.json Tracks configuration file for WashU json

创建时间：

2024-08-20

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