five

Expression dynamics of HAND1/2 in in vitro human cardiomyocyte differentiation

收藏
NIAID Data Ecosystem2026-03-12 收录
下载链接:
https://www.ncbi.nlm.nih.gov/sra/SRP277903
下载链接
链接失效反馈
官方服务:
资源简介:
Hand1 and Hand2 are transcriptional factors, and knockout mice of these genes show left and right ventricular hypoplasia, respectively. However, their function and expression in human cardiogenesis are not well studied. To delineate their expressions and assess their functions in human cardiomyocytes (CMs) in vitro, we established two triple reporter human induced pluripotent stem cell lines, HAND1mCherry, HAND2EGFP, with MYH6-driven iRFP670 or constitutive tagBFP expression and investigated their expression dynamics during cardiac differentiation. On day 5 of the differentiation, HAND1 expression marked cardiac progenitor cells. We profiled the CM subpopulations on day 20 with RNA-sequencing and found that mCherry+ CMs showed higher proliferative ability than mCherry- CMs and identified CD105 as a surface marker of highly proliferative CMs. Finally, we revealed that LEF1 is a key regulator of proliferation and is repressively regulated by HAND1 and HAND2. Overall design: HAND1-mCherry, HAND2-EGFP and MYH6-iRFP670 triple reporter human induced pluripotent stem cells (hiPSCs) were differentiated into cardiomyocytes. RNA-seq were performed with samples of day 0, 1 , 3 , 5 (purified mCherry+/-), 9 (purified iRFP670+/-), 20 (purified mCherry+EGFP-, mCherry-EGFP+, mCherry+EGFP- and mCherry+EGFP+ in ventricular protocol, and mCherry-EGFP+ in atrial protocol). All day 20 samples were isolated from iRFP670+ cardiomyocytes. For knockdown experiments, cardiomyocytes were isolated on day 15 and transfected with siRNAs of negative control (siNC), HAND1 (siHAND1), HAND2 (siHAND2), LEF1 (siLEF1) using MYH6-EGFP hiPSCs. RNAs were sampled on day 20. The transcriptomes of three/four independent samples were analyzed.
创建时间:
2021-09-01
5,000+
优质数据集
54 个
任务类型
进入经典数据集
二维码
社区交流群

面向社区/商业的数据集话题

二维码
科研交流群

面向高校/科研机构的开源数据集话题

数据驱动未来

携手共赢发展

商业合作