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Bench marking the assembly of viromes using Illumina, PacBio and Nanopore reads

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DataCite Commons2024-02-19 更新2024-07-13 收录
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https://figshare.le.ac.uk/articles/dataset/Bench_marking_the_assembly_of_viromes_using_Illumina_PacBio_and_Nanopore_reads/21346935/2
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资源简介:
Illumina PacBio ONT Flye Unicycler wtdbg2 (Redbean) Sequencing of a mock community of bacteriophages with three different sequencing technologies , in triplicate. Reads were assembled with multiple different assembly algorithms including  Assembled contigs were compared to the known input phage genomes to calculate completeness of genomes  <br> All raw reads were deposisted in the ENA. The attached file contains assembled contigs.  Files are named in the following manner  Library Number, Sequencing type , assembler used  eg  <em>lib1_PacBio_wtdbg2.fa</em> Library 1 sequenced using PacBio and assembed with wtdb2  <br> Data Update  <br> With advances in base calling the ONT data was re-basecalled.   <br> re-called ONT data is in  ONT_recalled.tar.gz and also avalible in the SRA .  <br> <br> <br> <br> <br>
提供机构:
University of Leicester
创建时间:
2024-02-19
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