Bench marking the assembly of viromes using Illumina, PacBio and Nanopore reads
收藏DataCite Commons2024-02-19 更新2024-07-13 收录
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https://figshare.le.ac.uk/articles/dataset/Bench_marking_the_assembly_of_viromes_using_Illumina_PacBio_and_Nanopore_reads/21346935/2
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资源简介:
Illumina PacBio ONT Flye Unicycler wtdbg2 (Redbean)
Sequencing of a mock community of bacteriophages with three different sequencing technologies , in triplicate.
Reads were assembled with multiple different assembly algorithms including
Assembled contigs were compared to the known input phage genomes to calculate completeness of genomes
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All raw reads were deposisted in the ENA.
The attached file contains assembled contigs.
Files are named in the following manner
Library Number, Sequencing type , assembler used
eg <em>lib1_PacBio_wtdbg2.fa</em>
Library 1 sequenced using PacBio and assembed with wtdb2
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Data Update
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With advances in base calling the ONT data was re-basecalled.
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re-called ONT data is in ONT_recalled.tar.gz and also avalible in the SRA .
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提供机构:
University of Leicester
创建时间:
2024-02-19



