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Number of sequences obtained for each subject and sample type by DPS.

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https://figshare.com/articles/dataset/_Number_of_sequences_obtained_for_each_subject_and_sample_type_by_DPS_/345205
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aTotal reads is the total coverage of sequences obtained after direct DPS. bValid reads are those sequences obtained after cleaning the total reads by selecting unique sequences with >70% homology to HXB2 and manual correction of homopolymer tacks. cUnique haplotypes are defined by similar sequences represented as a proportion ≥1% from the total unique reads. DPS, deep pyrosequencing; PR, protease; IN, integrase; RNA, plasma viral RNA; VC, cell virus isolates; VP, plasma virus isolates.
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2012-02-29
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