The extent of introgression between incipient <i>Clarkia</i> species is determined by temporal environmental variation and mating system

This zipped file is a directory containing all of the scripts and data need to reproduce analyses in the paper "The extent of introgression between incipient <i>Clarkia</i> species is determined by temporal environmental variation and mating system." There is a README document in the main directory that contains all information necessary to navigate the file structure, code, and data. There are a suite of folders that have code run in the command line - primarily bioinformatic code. There is an R markdown file (and a rendered html) with all code needed to make figures/tables/analyses in manuscript. There are two subdirectories "R_input_data" and "R_output" that are used with the R markdown file.<br>本压缩文件为一个目录，内含用于复现论文《初始克拉花属（Clarkia）物种间基因渐渗的程度受时间尺度环境变异与交配系统调控》中所有分析所需的脚本与数据。主目录下包含一份README文档，其中涵盖了用于浏览文件结构、代码与数据的全部必要信息。另有若干文件夹，内含主要为生物信息学代码的命令行运行代码。此外还包含一份R Markdown文件（以及渲染完成的HTML文件），内含生成论文所需图表、表格及开展分析的全部代码。另有两个子目录"R_input_data"与"R_output"，用于配合该R Markdown文件运行。

搜集汇总

背景与挑战

背景概述

该数据集是一个用于重现论文分析的压缩文件，包含脚本和数据，论文研究Clarkia物种间的基因渗入程度，重点探讨环境变化和交配系统对渗入程度的影响。数据集属于物种形成与灭绝类别，关键词涵盖speciation、introgression和mating systems等，文件大小为1.01 GB，采用CC BY 4.0许可。