Secondary structure and repetitive elements in the edited regions.
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https://figshare.com/articles/dataset/_Secondary_structure_and_repetitive_elements_in_the_edited_regions_/391843
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aThe edited region and its reverse complement were aligned using BLAST. We used the total number of aligning base pairs as an estimate of the length of the dsRNA.
bThe secondary structure of the RNA was calculated using RNAFold [50]. We used the maximal number of open brackets in the structure as an estimate of the length of the dsRNA.
cRegions used: 1.5 kbp flanking upstream and downstream of the edited regions for properties 1,2, and 3; 5 kbp for property 4.
dMeans are reported along with the standard error of the mean [sqrt(sample variance/n)].
eP-values were calculated using Mann-Whitney U test.
创建时间：
2011-10-20
