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Additional file 14 of Subtype-associated epigenomic landscape and 3D genome structure in bladder cancer

NIAID Data Ecosystem2026-03-12 收录

数据链接：

https://figshare.com/articles/dataset/Additional_file_14_of_Subtype-associated_epigenomic_landscape_and_3D_genome_structure_in_bladder_cancer/14429339 数据链接链接失效反馈

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Additional file 14: Table S13. Luminal-specific and Basal-specific loops.

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创建时间：

2021-04-15

三维基因组结构

染色质亚区室分析

We performed Hi-C on untreated Jurkat T cells growing in culture. We obtained contact maps with a final resolution of 5 kb where Topologically Associated Domains (TADs) are clearly visible. We identif

NIAID Data Ecosystem80

BMAL1 represses transposable elements independently of CLOCK in pluripotent cells [Hi-C]

转座元件表观调控

三维基因组结构

Genome profiling of BMAL1,TRIM28 and H3K9me3 analyzed by ChIP-seq in JM8+/+ and Bmal1-/- mESCs. Genome profiling of FlagBMAL1 in mESCs. High throughput capture chromosome conformation analysis (Hi-C)

NIAID Data Ecosystem40

The nuclear matrix associating protein HNRNPU functions as a key regulator of 3D genome architecture [Hi-C]

三维基因组结构

染色质互作

Higher-order chromatin conformation plays critical role in regulating gene expression and biological development, here we show that HNRNPU, a nuclear matrix attachment factor, is a regulator of 3D gen

NIAID Data Ecosystem30

Table_5_Profiling of 3D Genome Organization in Nasopharyngeal Cancer Needle Biopsy Patient Samples by a Modified Hi-C Approach.XLSX

鼻咽癌基因组学

三维基因组结构

Nasopharyngeal cancer (NPC), a cancer derived from epithelial cells in the nasopharynx, is a cancer common in China, Southeast Asia, and Africa. The three-dimensional (3D) genome organization of nasop

NIAID Data Ecosystem60

DNA methylation-linked chromatin accessibility affects genomic architecture in Arabidopsis. DNA methylation-linked chromatin accessibility affects genomic architecture in Arabidopsis

植物表观遗传学

三维基因组结构

DNA methylation is one of the most widely distributed epigenetic marks that has a profound impact on developmental regulation, yet its influence on chromatin accessibility and 3D genome architecture i

NIAID Data Ecosystem30

Additional file 14 of Subtype-associated epigenomic landscape and 3D genome structure in bladder cancer

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