five

Supplemental Datasets for: WhatsGNU: A Tool For Identifying Proteomic Novelty.

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https://zenodo.org/record/3633424
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资源简介:
Five precompressed databases are available for WhatsGNU: Ortholog Mode: WhatsGNU_TB_Ortholog.zip: Mycobacterium tuberculosis Version-07/09/2019 (compressed 26,794,006 proteins in 6563 genomes to 434,725 protein variants). WhatsGNU_Pa_Ortholog.zip: Pseudomonas aeruginosa Version-07/06/2019 (compressed 14,475,742 proteins in 4712 genomes to 1,288,892 protein variants). WhatsGNU_Sau_Ortholog.zip: Staphylococcus aureus Version-06/14/2019 (compressed 27,213,667 proteins in 10350 genomes to 571,848 protein variants). Big Data basic Mode: Senterica_Enterobase_basic_216642.pickle.gz: Salmonella enterica Enterobase Version-08/29/2019 (compressed 975,262,506 proteins in 216,642 genomes to 5,056,335 protein variants). Sau_Staphopia_basic_43914.pickle: Staphylococcus aureus Staphopia Version-06/27/2019 (compressed 115,178,200 proteins in 43,914 genomes to 2,228,761 protein variants). Figures_datasets.zip: The FASTA files and the WhatsGNU reports as input and output, respectively, which were used to produce panels in Figures 1 and 2 and supplementary figures 1, 2 and 3.
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2020-02-05
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