five

Rhodococcus erythropolis mono-culture in control groups

收藏
DataCite Commons2024-06-01 更新2024-08-19 收录
下载链接:
https://figshare.com/articles/dataset/Rhodococcus_erythropolis_mono-culture_in_control_groups/25943581/1
下载链接
链接失效反馈
官方服务:
资源简介:
Raw data from three parallel transcriptomes of <i>Rhodococcus erythropolis</i> mono-culture in 0 mM Al<sup>3+</sup>.The quality of the extracted RNA was assessed using a Nanodrop 2000 and an Agilent 4200 Tape Station bioanalyzer. Only RNA samples with an RNA integrity value (RIN) ≥7 were selected for cDNA library construction. The cDNA library fragments were purified using the AMPure XP system to ensure a preferred length of 400-500 bp. The number of PCR cycles was adjusted to 15, and the final amplified library was quality checked using a Bioanalyzer 2100 system. Finally, an equimolar library was constructed using the Kapa-sybr FAST qPCR Kit Light Cycler 480 and a reference standard from Kapa Biosystems.Each library was sequenced in paired-end mode using the TruSeq SBS kit v3-HS with a read length of 2 × 76 bp on the HiSeq2000 instrument (Illumina) according to the manufacturer's protocol for mRNA sequencing experiments. The <i>R. erythropolis</i> (GenBank assembly accession numbers: GCA_001715845.1) was used as the reference genome.<br>
提供机构:
figshare
创建时间:
2024-06-01
5,000+
优质数据集
54 个
任务类型
进入经典数据集
二维码
社区交流群

面向社区/商业的数据集话题

二维码
科研交流群

面向高校/科研机构的开源数据集话题

数据驱动未来

携手共赢发展

商业合作