Additional file 2 of Comparison of brain connectomes by MRI and genomics and its implication in Alzheimer’s disease

Additional file 2: Table S1. Probability of tract reaching brain region (Reach probability). Table S2. Brain region mapping between Desikan-Killany atlas and post-mortem brain labels. Table S3. Number of Tissue-to-Tissue (TTC) correlated genes for each pair of Region-of-interests (ROIs). Table S4. Pathway list with annotated subtypes. Table S5. Pathway interactions in brain region pairs that are that are significantly different in tract-bound. Table S6. Pathway interactions in brain region pairs that are that are significantly different in AD-tract-bound. Table S7. Association between covariates and diffusion measures in each tract. Table S8. Effect sizes for associations in ADNI3 and ADNI2. Table S9. Pathway over-representation analysis between brain region pairs connected by white matter tracts and region pairs not connected by tracts. Table S10. Pathway interaction graph (degree). Table S11. Pathway over-representation analysis of symmetric gene synchronization in brain region pairs connected by white matter tracts. Table S12. Association between gene expression of Toll receptor signaling in the blood and diffusion measures in the brain. Table S13. Number of subjects in each study per site.