Datasets for the Carpentry-style RNA-seq lesson
收藏NIAID Data Ecosystem2026-03-14 收录
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https://zenodo.org/record/3804519
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资源简介：
File descriptions:
- counts.txt: a dataframe of the sample raw counts. It is a tab separated file therefore data are in tabulated separated columns.
- experimental_design_modified.txt dataframe indicates the correspondence between samples and experimental conditions (e.g. control, treated).
- differential_genes.tsv dataframe contains the result of the DESeq2 analysis.
The counts.txt file was obtained by running the `v0.1.1` version of a RNA-Seq bioinformatic pipeline on the mRNA-Seq sequencing files from Vogel et al. (2016): https://www.ebi.ac.uk/ena/data/view/PRJEB13938.
Please read the original study (Vogel et al. 2016): https://nph.onlinelibrary.wiley.com/doi/full/10.1111/nph.14036
创建时间：
2023-03-22
